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Schizophrenia or delusion (more control exclusions)

Endpoint Browser PheWeb

KRA_PSY_SCHIZODEL_EXMORE

Endpoint definition

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Endpoint definition steps

FinnGen

Phenotype data

1. Apply sex-specific rule

None

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2. Check conditions

None

3. Check pre-conditions, main-only, mode, registry filters

Registry filters:

  • Hospital discharge: ICD-10 — F20-F29
  • Hospital discharge: ICD-9 — 295|29[7-8]
  • Hospital discharge: ICD-8 — 295|297|298[1-9]|299
  • Cause of death: ICD-10 — F20-F29
  • Cause of death: ICD-9 — 295|29[7-8]
  • Cause of death: ICD-8 — 295|297|298[1-9]|299

2 out of 7 registries used, show all original rules.

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4. Check minimum number of events

None

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5. Include endpoints

None

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6. Filter based on genotype QC (FinnGen only)

None

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Control definitions (FinnGen only)

Control exclude KRA_PSY_ANYMENTAL

Extra metadata

First used in FinnGen datafreeze DF2

Case counts by codes

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FinnGen case counts by registry codes:

No upset plot: script not run.

No upset table: script not run.

Summary Statistics

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-FinRegistry-

Key figures

All Female Male
Number of individuals
Whole population 172928 88075 83096
Only index persons 139867 72267 67600
Unadjusted period prevalence (%)
Whole population 2.42 2.52 2.32
Only index persons 2.62 2.66 2.58
Median age at first event (years)
Whole population 36.91 40.89 32.51
Only index persons 34.40 37.73 30.84

-FinnGen-

Key figures

All Female Male
Number of individuals 13737 7143 6594
Unadjusted period prevalence (%) 3.35 3.10 3.63
Median age at first event (years) 30.67 31.71 29.54

-FinRegistry-

Age distribution of first events

-FinnGen-

Age distribution of first events

-FinRegistry-

Year distribution of first events

-FinnGen-

Year distribution of first events

-FinRegistry-

Cumulative Incidence Function

-FinnGen-

Cumulative Incidence Function

Mortality – FinRegistry

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Relationships between endpoints

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Index endpoint: KRA_PSY_SCHIZODEL_EXMORE – Schizophrenia or delusion (more control exclusions)

GWS hits: 2

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