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Other and unspecified nonorganic psychotic disorders

DOID EFO Endpoint Browser PheWeb

F5_PSYCHOTH

psychosis: An abnormal condition of the mind that involves a loss of contact with reality. People experiencing psychosis may exhibit personality changes and thought disorder. Depending on its severity, this may be accompanied by unusual or bizarre behavior, as well as difficulty with social interaction and impairment in carrying out daily life activities.

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Endpoint definition

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Endpoint definition steps

FinnGen

Phenotype data

429209

1. Apply sex-specific rule

None

429209

2. Check conditions

None

429209

3. Check pre-conditions, main-only, mode, registry filters

Registry filters:

  • Hospital discharge: ICD-10 — F28, F29
  • Hospital discharge: ICD-9 — 2989
  • Hospital discharge: ICD-8 — 29999
  • Cause of death: ICD-10 — F28, F29
  • Cause of death: ICD-9 — 2989
  • Cause of death: ICD-8 — 29999

2 out of 7 registries used, show all original rules.

8341

4. Check minimum number of events

None

8341

5. Include endpoints

None

8341

6. Filter based on genotype QC (FinnGen only)

7928

Control definitions (FinnGen only)

Control exclude F5_SCHIZO

Extra metadata

Level in the ICD hierarchy 3
First used in FinnGen datafreeze DF2

Case counts by codes

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FinnGen case counts by registry codes:

generic upset plot

Upset plot

Full data table

Summary Statistics

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-FinRegistry-

Key figures

All Female Male
Number of individuals
Whole population 88022 43237 44010
Only index persons 76933 38292 38641
Unadjusted period prevalence (%)
Whole population 1.23 1.24 1.23
Only index persons 1.44 1.41 1.48
Median age at first event (years)
Whole population 34.75 38.19 31.23
Only index persons 33.05 36.04 30.08

-FinnGen-

Key figures

All Female Male
Number of individuals 7928 4201 3727
Unadjusted period prevalence (%) 1.93 1.82 2.05
Median age at first event (years) 30.66 31.75 29.44

-FinRegistry-

Age distribution of first events

-FinnGen-

Age distribution of first events

-FinRegistry-

Year distribution of first events

-FinnGen-

Year distribution of first events

-FinRegistry-

Cumulative Incidence Function

-FinnGen-

Cumulative Incidence Function

Mortality – FinRegistry

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Relationships between endpoints

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Index endpoint: F5_PSYCHOTH – Other and unspecified nonorganic psychotic disorders

GWS hits: -

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