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Corneal pigmentations and deposits

DOID EFO Endpoint Browser PheWeb

H7_CORNEAPIGMENT

corneal disease: A non-neoplastic or neoplastic disorder that affects the cornea. Representative examples include keratitis, bullous keratopathy, and squamous cell carcinoma.

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Endpoint definition

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Endpoint definition steps

FinnGen

Phenotype data

429209

1. Apply sex-specific rule

None

429209

2. Check conditions

None

429209

3. Check pre-conditions, main-only, mode, registry filters

Registry filters:

  • Hospital discharge: ICD-10 — H18.0#
  • Hospital discharge: ICD-9 — 3711
  • Hospital discharge: ICD-8 — 37100
  • Cause of death: ICD-10 — H18.0#
  • Cause of death: ICD-9 — 3711
  • Cause of death: ICD-8 — 37100

2 out of 7 registries used, show all original rules.

115

4. Check minimum number of events

None

115

5. Include endpoints

None

115

6. Filter based on genotype QC (FinnGen only)

108

Control definitions (FinnGen only)

Control exclude H7_SCLERACORNEA

Extra metadata

Level in the ICD hierarchy 4
First used in FinnGen datafreeze DF2
Parent code in ICD-10 H18
Name in latin Pigmentationes et alia deposita corneae

Case counts by codes

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FinnGen case counts by registry codes:

generic upset plot

Upset plot

Full data table

Summary Statistics

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-FinRegistry-

Key figures

All Female Male
Number of individuals
Whole population 1538 814 709
Only index persons 1121 568 553
Unadjusted period prevalence (%)
Whole population 0.02 0.02 0.02
Only index persons 0.02 0.02 0.02
Median age at first event (years)
Whole population 50.64 54.96 45.56
Only index persons 44.59 47.91 41.17

-FinnGen-

Key figures

All Female Male
Number of individuals 108 57 51
Unadjusted period prevalence (%) 0.03 0.02 0.03
Median age at first event (years) 48.79 47.98 49.70

-FinRegistry-

Age distribution of first events

-FinnGen-

Age distribution of first events

-FinRegistry-

Year distribution of first events

-FinnGen-

Year distribution of first events

-FinRegistry-

Cumulative Incidence Function

-FinnGen-

Cumulative Incidence Function

Mortality – FinRegistry

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Relationships between endpoints

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Index endpoint: H7_CORNEAPIGMENT – Corneal pigmentations and deposits

GWS hits: -

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