≡ Risteys
FR+FG R10

Documentation Changelog GitHub Contact & Feedback

Respiratory tuberculosis, bacteriologically and histologically confirmed

EFO Endpoint Browser PheWeb

AB1_RESP_TUBERCU_CONF

Endpoint definition

↥

Endpoint definition steps

FinnGen

Phenotype data

429209

1. Apply sex-specific rule

None

429209

2. Check conditions

None

429209

3. Check pre-conditions, main-only, mode, registry filters

Registry filters:

  • Hospital discharge: ICD-10 — A15
  • Hospital discharge: ICD-9 — 01[1-2].A
  • Cause of death: ICD-10 — A15
  • Cause of death: ICD-9 — 01[1-2].A

2 out of 7 registries used, show all original rules.

624

4. Check minimum number of events

None

624

5. Include endpoints

None

624

6. Filter based on genotype QC (FinnGen only)

588

Control definitions (FinnGen only)

Control exclude AB1_TUBERCULOSIS

Extra metadata

Level in the ICD hierarchy 4
First used in FinnGen datafreeze DF5

Case counts by codes

↥

FinnGen case counts by registry codes:

generic upset plot

Upset plot

Full data table

Summary Statistics

↥

-FinRegistry-

Key figures

All Female Male
Number of individuals
Whole population 10043 3678 6041
Only index persons 5568 2240 3328
Unadjusted period prevalence (%)
Whole population 0.15 0.11 0.17
Only index persons 0.11 0.08 0.13
Median age at first event (years)
Whole population 65.07 68.60 63.07
Only index persons 58.70 59.64 58.07

-FinnGen-

Key figures

All Female Male
Number of individuals 588 177 411
Unadjusted period prevalence (%) 0.18 0.08 0.23
Median age at first event (years) 63.32 54.41 67.15

-FinRegistry-

Age distribution of first events

-FinnGen-

Age distribution of first events

-FinRegistry-

Year distribution of first events

-FinnGen-

Year distribution of first events

-FinRegistry-

Cumulative Incidence Function

-FinnGen-

Cumulative Incidence Function

Mortality – FinRegistry

↥

Relationships between endpoints

↥

Index endpoint: AB1_RESP_TUBERCU_CONF – Respiratory tuberculosis, bacteriologically and histologically confirmed

GWS hits: -

loading spinner Loading Relationships table