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Implicit viral Sepsis

Endpoint Browser

AB1_SEPSIS_VIRAL_IMPL

Endpoint definition

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Endpoint definition steps

FinnGen

Phenotype data

429209

1. Apply sex-specific rule

None

429209

2. Check conditions

  • AB1_SEPSIS_CONDITION
44646

3. Check pre-conditions, main-only, mode, registry filters

Registry filters:

  • Hospital discharge: ICD-10 — A08|A8[0-1]|A8[3-9]|A9[2-9]|B0[0-9]|B2[5-7]|B3[34]|B97|J09|J1[0-2]|U04
  • Hospital discharge: ICD-9 — 0086[ABCX]|04[4-9]|05[0-7]|06[0-6]|072|074|075|0780A|0743A|0785|0786B|0787X|0788X|0790A|0791A|0748X|0793A|0788D|480|487|5738X|7908A
  • Cause of death: ICD-10 — A08|A8[0-1]|A8[3-9]|A9[2-9]|B0[0-9]|B2[5-7]|B3[34]|B97|J09|J1[0-2]|U04
  • Cause of death: ICD-9 — 0086[ABCX]|04[4-9]|05[0-7]|06[0-6]|072|074|075|0780A|0743A|0785|0786B|0787X|0788X|0790A|0791A|0748X|0793A|0788D|480|487|5738X|7908A

2 out of 7 registries used, show all original rules.

6366

4. Check minimum number of events

None

6366

5. Include endpoints

None

6366

6. Filter based on genotype QC (FinnGen only)

6123

Control definitions (FinnGen only)

Extra metadata

First used in FinnGen datafreeze DF8

Case counts by codes

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FinnGen case counts by registry codes:

generic upset plot

Upset plot

Full data table

Summary Statistics

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-FinRegistry-

This endpoint is excluded from FinRegistry analyses (omitted endpoint).

-FinnGen-

Key figures

All Female Male
Number of individuals 6123 3016 3107
Unadjusted period prevalence (%) 1.51 1.31 1.71
Median age at first event (years) 62.58 59.16 65.89

-FinnGen-

Age distribution of first events

-FinnGen-

Year distribution of first events

-FinnGen-

Cumulative Incidence Function

Not a core endpoint, no data to show.

Mortality – FinRegistry

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This endpoint is excluded from FinRegistry analyses (omitted endpoint).

Relationships between endpoints

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Index endpoint: AB1_SEPSIS_VIRAL_IMPL – Implicit viral Sepsis

GWS hits: -

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