Congenital malformations of the musculoskeletal system, not elsewhere classified

Q17_CONGEN_MALFO_MUSCULOS_SYSTEM_NOT_ELSEW_CLASSIFIED

Endpoint definition

Endpoint definition steps

FinnGen

Phenotype data

429209

1. Apply sex-specific rule

None

429209

2. Check conditions

None

429209

3. Check pre-conditions, main-only, mode, registry filters

Registry filters:

  • Hospital discharge: ICD-10 Q79
  • Cause of death: ICD-10 Q79

2 out of 7 registries used, show all original rules.

405

4. Check minimum number of events

None

405

5. Include endpoints

None

405

6. Filter based on genotype QC (FinnGen only)

393

Control definitions (FinnGen only)

Extra metadata

Level in the ICD hierarchy 3
First used in FinnGen datafreeze DF4
Parent code in ICD-10 Q6[5-9]|Q7
Name in latin Malformationes congenitae systematis musculosceletalis non alibi classificatae

Case counts by codes

FinnGen case counts by registry codes:

generic upset plot

Upset plot

Full data table

Summary Statistics

-FinRegistry-

Key figures

All Female Male
Number of individuals
Whole population 3921 2562 1350
Only index persons 3291 2268 1023
Unadjusted period prevalence (%)
Whole population 0.06 0.07 0.04
Only index persons 0.07 0.08 0.04
Median age at first event (years)
Whole population 22.80 30.56 8.01
Only index persons 27.31 33.04 14.61

-FinnGen-

Key figures

All Female Male
Number of individuals 393 335 58
Unadjusted period prevalence (%) 0.13 0.15 0.03
Median age at first event (years) 38.96 38.25 43.07

-FinRegistry-

Age distribution of first events

-FinnGen-

Age distribution of first events

-FinRegistry-

Year distribution of first events

-FinnGen-

Year distribution of first events

-FinRegistry-

Cumulative Incidence Function

-FinnGen-

Cumulative Incidence Function

Mortality – FinRegistry

Relationships between endpoints

Index endpoint: Q17_CONGEN_MALFO_MUSCULOS_SYSTEM_NOT_ELSEW_CLASSIFIED – Congenital malformations of the musculoskeletal system, not elsewhere classified

GWS hits: 1

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