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Cleft hard palate NOS

Endpoint Browser PheWeb

Q17_CLEFT_HARD_PALATE_NOS

Endpoint definition

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Endpoint definition steps

FinnGen

Phenotype data

429209

1. Apply sex-specific rule

None

429209

2. Check conditions

  • not Q17_CLEFT_PALATE_EXCLUDE
428574

3. Check pre-conditions, main-only, mode, registry filters

Registry filters:

  • Hospital discharge: ICD-10 — Q35.1
  • Hospital discharge: ICD-9 — 7490X
  • Cause of death: ICD-10 — Q35.1
  • Cause of death: ICD-9 — 749

2 out of 7 registries used, show all original rules.

146

4. Check minimum number of events

None

146

5. Include endpoints

None

146

6. Filter based on genotype QC (FinnGen only)

141

Control definitions (FinnGen only)

Control conditions not Q17_CLEFT_PALATE_EXCLUDE

Extra metadata

First used in FinnGen datafreeze DF7

Case counts by codes

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FinnGen case counts by registry codes:

generic upset plot

Upset plot

Full data table

Summary Statistics

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-FinRegistry-

Key figures

All Female Male
Number of individuals
Whole population 2587 1496 1087
Only index persons 2115 1232 883
Unadjusted period prevalence (%)
Whole population 0.04 0.04 0.03
Only index persons 0.04 0.05 0.03
Median age at first event (years)
Whole population 4.64 4.10 5.17
Only index persons 6.77 6.27 7.47

-FinnGen-

Key figures

All Female Male
Number of individuals 141 102 39
Unadjusted period prevalence (%) 0.04 0.04 0.02
Median age at first event (years) 15.30 16.02 13.42

-FinRegistry-

Age distribution of first events

-FinnGen-

Age distribution of first events

-FinRegistry-

Year distribution of first events

-FinnGen-

Year distribution of first events

-FinRegistry-

Cumulative Incidence Function

-FinnGen-

Cumulative Incidence Function

Mortality – FinRegistry

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Relationships between endpoints

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Index endpoint: Q17_CLEFT_HARD_PALATE_NOS – Cleft hard palate NOS

GWS hits: 2

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