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Pilonidal cyst

EFO MESH Endpoint Browser PheWeb

L12_PILONIDALCYST

Endpoint definition

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Endpoint definition steps

FinnGen

Phenotype data

429209

1. Apply sex-specific rule

None

429209

2. Check conditions

None

429209

3. Check pre-conditions, main-only, mode, registry filters

Registry filters:

  • Hospital discharge: ICD-10 — L05
  • Hospital discharge: ICD-9 — 685
  • Cause of death: ICD-10 — L05
  • Cause of death: ICD-9 — 685

2 out of 7 registries used, show all original rules.

3157

4. Check minimum number of events

None

3157

5. Include endpoints

None

3157

6. Filter based on genotype QC (FinnGen only)

3032

Control definitions (FinnGen only)

Control exclude L12_INFECT_SKIN

Extra metadata

Level in the ICD hierarchy 3
First used in FinnGen datafreeze DF2
Parent code in ICD-10 L00-L08
Name in latin Cysta pilonidalis

Case counts by codes

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FinnGen case counts by registry codes:

generic upset plot

Upset plot

Full data table

Summary Statistics

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-FinRegistry-

Key figures

All Female Male
Number of individuals
Whole population 37426 10491 26770
Only index persons 36039 10189 25850
Unadjusted period prevalence (%)
Whole population 0.62 0.30 0.75
Only index persons 0.81 0.37 0.99
Median age at first event (years)
Whole population 26.92 24.70 27.76
Only index persons 26.75 24.65 27.58

-FinnGen-

Key figures

All Female Male
Number of individuals 3032 1151 1881
Unadjusted period prevalence (%) 0.83 0.50 1.03
Median age at first event (years) 29.57 26.25 31.60

-FinRegistry-

Age distribution of first events

-FinnGen-

Age distribution of first events

-FinRegistry-

Year distribution of first events

-FinnGen-

Year distribution of first events

-FinRegistry-

Cumulative Incidence Function

-FinnGen-

Cumulative Incidence Function

Mortality – FinRegistry

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Relationships between endpoints

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Index endpoint: L12_PILONIDALCYST – Pilonidal cyst

GWS hits: 4

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