Infections of the skin and subcutaneous tissue

L12_INFECT_SKIN

Tuberculosis, Cutaneous: Tuberculosis of the skin. It includes scrofuloderma and tuberculid, but not LUPUS VULGARIS.

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Endpoint definition

Endpoint definition steps

FinnGen

Phenotype data

429209

1. Apply sex-specific rule

None

429209

2. Check conditions

None

429209

3. Check pre-conditions, main-only, mode, registry filters

Registry filters:

  • Hospital discharge: ICD-10 L00-L08
  • Cause of death: ICD-10 L00-L08

2 out of 7 registries used, show all original rules.

20920

4. Check minimum number of events

None

20920

5. Include endpoints

24394

6. Filter based on genotype QC (FinnGen only)

23513

Control definitions (FinnGen only)

Controls for this endpoint are individuals that are not cases.

Extra metadata

Level in the ICD hierarchy 2
First used in FinnGen datafreeze DF2

Case counts by codes

FinnGen case counts by registry codes:

generic upset plot

Upset plot

Full data table

Summary Statistics

-FinRegistry-

Key figures

All Female Male
Number of individuals
Whole population 292113 122997 167237
Only index persons 252737 107278 145459
Unadjusted period prevalence (%)
Whole population 4.17 3.52 4.67
Only index persons 4.87 3.94 5.55
Median age at first event (years)
Whole population 35.06 37.42 33.21
Only index persons 35.44 38.11 33.48

-FinnGen-

Key figures

All Female Male
Number of individuals 23513 11492 12021
Unadjusted period prevalence (%) 5.82 4.99 6.61
Median age at first event (years) 45.68 43.44 47.82

-FinRegistry-

Age distribution of first events

-FinnGen-

Age distribution of first events

-FinRegistry-

Year distribution of first events

-FinnGen-

Year distribution of first events

-FinRegistry-

Cumulative Incidence Function

-FinnGen-

Cumulative Incidence Function

Mortality – FinRegistry

Relationships between endpoints

Index endpoint: L12_INFECT_SKIN – Infections of the skin and subcutaneous tissue

GWS hits: 2

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