Any mental disorder, or suicide (or attempt), or psychic disorders complicating pregnancy, partum or puerperium or nerve system disorders (more control exclusions)

KRA_PSY_ANYMENTAL_SUICID_PREG_NERV_EXMORE

Endpoint definition

Endpoint definition steps

FinnGen

Phenotype data

1. Apply sex-specific rule

None

-

2. Check conditions

None

3. Check pre-conditions, main-only, mode, registry filters

Registry filters:

  • Hospital discharge: ICD-10 O99.3
  • Hospital discharge: ICD-9 6484X
  • Cause of death: ICD-10 O99.3
  • Cause of death: ICD-9 6484X

2 out of 7 registries used, show all original rules.

-

4. Check minimum number of events

None

-

5. Include endpoints

-

6. Filter based on genotype QC (FinnGen only)

None

-

Control definitions (FinnGen only)

Control exclude KRA_PSY_ANYMENTAL

Extra metadata

First used in FinnGen datafreeze DF2
Parent code in ICD-10 O99
Name in latin Perturbationes psychicae et morbi systematis nervosi complicantes graviditatem, partum et puerperium

Similar endpoints

List of similar endpoints to Any mental disorder, or suicide (or attempt), or psychic disorders complicating pregnancy, partum or puerperium or nerve system disorders (more control exclusions) based on the number of shared cases.

Venn diagram with an highlighted set fully inside another set Broader endpoints:

Venn diagram with a set fully inside an highlighted set Narrower endpoints:

Case counts by codes

FinnGen case counts by registry codes:

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No upset table: script not run.

Summary Statistics

-FinRegistry-

Key figures

All Female Male
Number of individuals
Whole population 156606 76311 78204
Only index persons 108675 65093 43582
Unadjusted period prevalence (%)
Whole population 2.19 2.19 2.19
Only index persons 2.10 2.39 1.66
Median age at first event (years)
Whole population 35.21 32.22 37.86
Only index persons 32.84 30.95 35.68

-FinnGen-

Key figures

All Female Male
Number of individuals 11872 7919 3953
Unadjusted period prevalence (%) 3.02 3.44 2.17
Median age at first event (years) 33.82 31.52 38.44

-FinRegistry-

Age distribution of first events

-FinnGen-

Age distribution of first events

-FinRegistry-

Year distribution of first events

-FinnGen-

Year distribution of first events

-FinRegistry-

Cumulative Incidence Function

-FinnGen-

Cumulative Incidence Function

Mortality – FinRegistry

Relationships between endpoints

Index endpoint: KRA_PSY_ANYMENTAL_SUICID_PREG_NERV_EXMORE – Any mental disorder, or suicide (or attempt), or psychic disorders complicating pregnancy, partum or puerperium or nerve system disorders (more control exclusions)

GWS hits: 2

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