bacterial pneumonia: Inflammation of the lung parenchyma that is caused by bacterial infections.
Endpoint definition
↥
Endpoint definition steps |
FinnGen |
|---|---|
Phenotype data |
429209 |
1. Apply sex-specific ruleNone |
429209 |
2. Check conditionsNone |
429209 |
3. Check pre-conditions, main-only, mode, registry filtersNone 0 out of 7 registries used, show all original rules. |
0 |
4. Check minimum number of eventsNone |
0 |
5. Include endpoints |
18158 |
6. Filter based on genotype QC (FinnGen only) |
17511 |
Control definitions (FinnGen only)
Control exclude
J10_INFLUPNEU
Extra metadata
Level in the ICD hierarchy
3
First used in FinnGen datafreeze
DF2
Similar endpoints
↥List of similar endpoints to
Bacterial pneumoniae
based on the number of shared cases.
Broader endpoints:
- Bacterial pneumonia (organism specified)
- Pneumonia (excl. viral and due to other infectious organisms not elsewhere classified)
- Pneumonias (Asthma/COPD co-morbidities)
- COPD/asthma related pneumonia or pneumonia derived septicaemia
- COPD/asthma/ILD related pneumonia or pneumonia derived septicaemia
Narrower endpoints:
Case counts by codes
↥FinnGen case counts by registry codes:
No data for upset plot.
No data for upset table.
Summary Statistics
↥-FinRegistry-
Key figures
| All | Female | Male | |
|---|---|---|---|
| Number of individuals | |||
| Whole population | 247249 | 106677 | 136841 |
| Only index persons | 171910 | 78235 | 93675 |
| Unadjusted period prevalence (%) | |||
| Whole population | 3.49 | 3.06 | 3.82 |
| Only index persons | 3.26 | 2.88 | 3.58 |
| Median age at first event (years) | |||
| Whole population | 67.06 | 68.45 | 65.77 |
| Only index persons | 60.69 | 62.02 | 59.57 |
-FinnGen-
Key figures
| All | Female | Male | |
|---|---|---|---|
| Number of individuals | 17511 | 7059 | 10452 |
| Unadjusted period prevalence (%) | 4.67 | 3.07 | 5.75 |
| Median age at first event (years) | 62.71 | 55.34 | 67.69 |
-FinRegistry-
Age distribution of first events
-FinnGen-
Age distribution of first events
-FinRegistry-
Year distribution of first events
-FinnGen-
Year distribution of first events
-FinRegistry-
Cumulative Incidence Function
-FinnGen-
Cumulative Incidence Function
Mortality – FinRegistry
↥Relationships between endpoints
↥Index endpoint: J10_PNEUMOBACT – Bacterial pneumoniae
GWS hits: 3
Loading Relationships table