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Severe mental retardation

DOID EFO Endpoint Browser PheWeb

F5_SEVRET

Endpoint definition

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Endpoint definition steps

FinnGen

Phenotype data

429209

1. Apply sex-specific rule

None

429209

2. Check conditions

None

429209

3. Check pre-conditions, main-only, mode, registry filters

Registry filters:

  • Hospital discharge: ICD-10 — F72
  • Hospital discharge: ICD-9 — 3181
  • Hospital discharge: ICD-8 — 313
  • Cause of death: ICD-10 — F72
  • Cause of death: ICD-9 — 3181
  • Cause of death: ICD-8 — 313

2 out of 7 registries used, show all original rules.

75

4. Check minimum number of events

None

75

5. Include endpoints

None

75

6. Filter based on genotype QC (FinnGen only)

72

Control definitions (FinnGen only)

Control exclude F5_MENTRET

Extra metadata

Level in the ICD hierarchy 3
First used in FinnGen datafreeze DF2
Parent code in ICD-10 F70-F79
Name in latin Retardatio mentalis gravis

Case counts by codes

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FinnGen case counts by registry codes:

generic upset plot

Upset plot

Full data table

Summary Statistics

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-FinRegistry-

Key figures

All Female Male
Number of individuals
Whole population 5092 2194 2897
Only index persons 4034 1735 2299
Unadjusted period prevalence (%)
Whole population 0.07 0.06 0.08
Only index persons 0.08 0.06 0.09
Median age at first event (years)
Whole population 23.02 24.33 22.03
Only index persons 22.29 23.33 21.50

-FinnGen-

Key figures

All Female Male
Number of individuals 72 30 42
Unadjusted period prevalence (%) 0.02 0.01 0.02
Median age at first event (years) 26.71 15.62 34.63

-FinRegistry-

Age distribution of first events

-FinnGen-

Age distribution of first events

-FinRegistry-

Year distribution of first events

-FinnGen-

Year distribution of first events

-FinRegistry-

Cumulative Incidence Function

-FinnGen-

Cumulative Incidence Function

Mortality – FinRegistry

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Relationships between endpoints

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Index endpoint: F5_SEVRET – Severe mental retardation

GWS hits: -

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