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Squamous cell neoplasms and carcinomas of the skin (controls excluding all cancers)

Endpoint Browser PheWeb

C3_SQUOMOUS_CELL_CARCINOMA_SKIN_EXALLC

Endpoint definition

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Endpoint definition steps

FinnGen

Phenotype data

1. Apply sex-specific rule

None

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2. Check conditions

None

3. Check pre-conditions, main-only, mode, registry filters

Registry filters:

3 out of 7 registries used, show all original rules.

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4. Check minimum number of events

None

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5. Include endpoints

None

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6. Filter based on genotype QC (FinnGen only)

None

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Control definitions (FinnGen only)

Control exclude C3_CANCER, C3_CANCER_WIDE

Extra metadata

Level in the ICD hierarchy C
First used in FinnGen datafreeze DF9

Case counts by codes

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FinnGen case counts by registry codes:

No upset plot: script not run.

No upset table: script not run.

Summary Statistics

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-FinRegistry-

Key figures

All Female Male
Number of individuals
Whole population 41339 19341 21596
Only index persons 33376 16018 17358
Unadjusted period prevalence (%)
Whole population 0.58 0.55 0.60
Only index persons 0.63 0.59 0.66
Median age at first event (years)
Whole population 78.18 79.88 76.72
Only index persons 78.38 79.88 77.00

-FinnGen-

Key figures

All Female Male
Number of individuals 3531 1267 2264
Unadjusted period prevalence (%) 1.00 0.55 1.25
Median age at first event (years) 74.90 74.02 75.39

-FinRegistry-

Age distribution of first events

-FinnGen-

Age distribution of first events

-FinRegistry-

Year distribution of first events

-FinnGen-

Year distribution of first events

-FinRegistry-

Cumulative Incidence Function

-FinnGen-

Cumulative Incidence Function

Mortality – FinRegistry

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Relationships between endpoints

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Index endpoint: C3_SQUOMOUS_CELL_CARCINOMA_SKIN_EXALLC – Squamous cell neoplasms and carcinomas of the skin (controls excluding all cancers)

GWS hits: 9

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