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Viral agents as the cause of diseases classified to other chapters

EFO Endpoint Browser PheWeb

AB1_VIRAL_INOTHER

Endpoint definition

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Endpoint definition steps

FinnGen

Phenotype data

429209

1. Apply sex-specific rule

None

429209

2. Check conditions

None

429209

3. Check pre-conditions, main-only, mode, registry filters

Registry filters:

  • Hospital discharge: ICD-10 — B97
  • Cause of death: ICD-10 — B97

2 out of 7 registries used, show all original rules.

606

4. Check minimum number of events

None

606

5. Include endpoints

None

606

6. Filter based on genotype QC (FinnGen only)

577

Control definitions (FinnGen only)

Extra metadata

Level in the ICD hierarchy 3
First used in FinnGen datafreeze DF5

Case counts by codes

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FinnGen case counts by registry codes:

generic upset plot

Upset plot

Full data table

Summary Statistics

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-FinRegistry-

Key figures

All Female Male
Number of individuals
Whole population 5957 3647 2291
Only index persons 4638 3028 1610
Unadjusted period prevalence (%)
Whole population 0.09 0.10 0.06
Only index persons 0.09 0.11 0.06
Median age at first event (years)
Whole population 33.79 33.38 34.36
Only index persons 42.90 39.38 49.53

-FinnGen-

Key figures

All Female Male
Number of individuals 577 336 241
Unadjusted period prevalence (%) 0.14 0.15 0.13
Median age at first event (years) 48.55 42.16 57.47

-FinRegistry-

Age distribution of first events

-FinnGen-

Age distribution of first events

-FinRegistry-

Year distribution of first events

-FinnGen-

Year distribution of first events

-FinRegistry-

Cumulative Incidence Function

-FinnGen-

Cumulative Incidence Function

Mortality – FinRegistry

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Relationships between endpoints

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Index endpoint: AB1_VIRAL_INOTHER – Viral agents as the cause of diseases classified to other chapters

GWS hits: 1

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