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Herpesviral [herpes simplex] infections

EFO Endpoint Browser PheWeb

AB1_HERPES_SIMPLEX

Endpoint definition

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Endpoint definition steps

FinnGen

Phenotype data

429209

1. Apply sex-specific rule

None

429209

2. Check conditions

None

429209

3. Check pre-conditions, main-only, mode, registry filters

Registry filters:

  • Hospital discharge: ICD-10 — B00
  • Hospital discharge: ICD-9 — 05[4]
  • Hospital discharge: ICD-8 — 05[4]
  • Hospital discharge: excluded ICD-9 — 0541A
  • Hospital discharge: excluded ICD-8 — 0540[2]
  • Cause of death: ICD-10 — B00
  • Cause of death: ICD-9 — 05[4]
  • Cause of death: ICD-8 — 05[4]
  • Cause of death: excluded ICD-9 — 0541A
  • Cause of death: excluded ICD-8 — 0540[2]

2 out of 7 registries used, show all original rules.

3873

4. Check minimum number of events

None

3873

5. Include endpoints

None

3873

6. Filter based on genotype QC (FinnGen only)

3723

Control definitions (FinnGen only)

Extra metadata

Level in the ICD hierarchy 3
First used in FinnGen datafreeze DF5

Case counts by codes

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FinnGen case counts by registry codes:

generic upset plot

Upset plot

Full data table

Summary Statistics

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-FinRegistry-

Key figures

All Female Male
Number of individuals
Whole population 37387 21787 15388
Only index persons 33592 20093 13499
Unadjusted period prevalence (%)
Whole population 0.54 0.62 0.43
Only index persons 0.65 0.74 0.52
Median age at first event (years)
Whole population 41.45 42.64 39.62
Only index persons 40.80 42.22 38.70

-FinnGen-

Key figures

All Female Male
Number of individuals 3723 2454 1269
Unadjusted period prevalence (%) 0.94 1.07 0.70
Median age at first event (years) 47.96 45.23 53.23

-FinRegistry-

Age distribution of first events

-FinnGen-

Age distribution of first events

-FinRegistry-

Year distribution of first events

-FinnGen-

Year distribution of first events

-FinRegistry-

Cumulative Incidence Function

-FinnGen-

Cumulative Incidence Function

Mortality – FinRegistry

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Relationships between endpoints

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Index endpoint: AB1_HERPES_SIMPLEX – Herpesviral [herpes simplex] infections

GWS hits: 1

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