Other congenital malformations of the digestive system

Q17_OTHER_CONGEN_MALFO_DIGES_SYSTEM1

Endpoint definition

Endpoint definition steps

FinnGen

Phenotype data

429209

1. Apply sex-specific rule

None

429209

2. Check conditions

None

429209

3. Check pre-conditions, main-only, mode, registry filters

Registry filters:

  • Hospital discharge: ICD-10 Q38-Q45
  • Cause of death: ICD-10 Q38-Q45

2 out of 7 registries used, show all original rules.

1319

4. Check minimum number of events

None

1319

5. Include endpoints

1319

6. Filter based on genotype QC (FinnGen only)

1270

Control definitions (FinnGen only)

Controls for this endpoint are individuals that are not cases.

Extra metadata

Level in the ICD hierarchy 2
First used in FinnGen datafreeze DF4
Parent code in ICD-10 Q
Name in latin Aliae malformationes congenitae systematis digestorii

Similar endpoints

Case counts by codes

FinnGen case counts by registry codes:

generic upset plot

Upset plot

Full data table

Summary Statistics

-FinRegistry-

Key figures

All Female Male
Number of individuals
Whole population 34635 12697 21890
Only index persons 22487 8662 13825
Unadjusted period prevalence (%)
Whole population 0.52 0.36 0.61
Only index persons 0.45 0.32 0.53
Median age at first event (years)
Whole population 4.64 5.19 4.19
Only index persons 6.15 7.32 5.43

-FinnGen-

Key figures

All Female Male
Number of individuals 1270 689 581
Unadjusted period prevalence (%) 0.31 0.30 0.32
Median age at first event (years) 40.11 39.42 40.92

-FinRegistry-

Age distribution of first events

-FinnGen-

Age distribution of first events

-FinRegistry-

Year distribution of first events

-FinnGen-

Year distribution of first events

-FinRegistry-

Cumulative Incidence Function

-FinnGen-

Cumulative Incidence Function

Mortality – FinRegistry

Relationships between endpoints

Index endpoint: Q17_OTHER_CONGEN_MALFO_DIGES_SYSTEM1 – Other congenital malformations of the digestive system

GWS hits: 7

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