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Infections of genitourinary tract in pregnancy

DOID EFO Endpoint Browser PheWeb

O15_PREG_GU_INFECT

Endpoint definition

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Endpoint definition steps

FinnGen

Phenotype data

429209

1. Apply sex-specific rule

only females

239906

2. Check conditions

None

239906

3. Check pre-conditions, main-only, mode, registry filters

Registry filters:

  • Hospital discharge: ICD-10 — O23
  • Hospital discharge: ICD-9 — 646[5-6]
  • Hospital discharge: ICD-8 — 635
  • Cause of death: ICD-10 — O23
  • Cause of death: ICD-9 — 646[5-6]
  • Cause of death: ICD-8 — 635

2 out of 7 registries used, show all original rules.

3383

4. Check minimum number of events

None

3383

5. Include endpoints

None

3383

6. Filter based on genotype QC (FinnGen only)

3272

Control definitions (FinnGen only)

Control exclude O15_PREG_OTHER_MAT_DISORD

Extra metadata

Level in the ICD hierarchy 3
First used in FinnGen datafreeze DF5
Parent code in ICD-10 O20-O29
Name in latin Infectiones organorum urogenitalium in graviditate

Case counts by codes

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FinnGen case counts by registry codes:

generic upset plot

Upset plot

Full data table

Summary Statistics

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-FinRegistry-

Key figures

All Female Male
Number of individuals
Whole population 32333 32333 -
Only index persons 31397 31397 -
Unadjusted period prevalence (%)
Whole population 0.93 0.93 -
Only index persons 1.15 1.15 -
Median age at first event (years)
Whole population - 27.49 -
Only index persons - 27.51 -

-FinnGen-

Key figures

All Female Male
Number of individuals 3272 3272 -
Unadjusted period prevalence (%) 1.42 1.42 -
Median age at first event (years) 27.52 27.52 -

-FinRegistry-

Age distribution of first events

-FinnGen-

Age distribution of first events

-FinRegistry-

Year distribution of first events

-FinnGen-

Year distribution of first events

-FinRegistry-

Cumulative Incidence Function

-FinnGen-

Cumulative Incidence Function

Mortality – FinRegistry

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Relationships between endpoints

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Index endpoint: O15_PREG_GU_INFECT – Infections of genitourinary tract in pregnancy

GWS hits: -

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