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Spermatocele

DOID EFO Endpoint Browser PheWeb

N14_SPERMATOCELE

spermatocele: A cystic dilation of the EPIDIDYMIS, usually in the head portion (caput epididymis). The cyst fluid contains dead SPERMATOZOA and can be easily differentiated from TESTICULAR HYDROCELE and other testicular lesions.

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Endpoint definition

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Endpoint definition steps

FinnGen

Phenotype data

429209

1. Apply sex-specific rule

only males

189303

2. Check conditions

None

189303

3. Check pre-conditions, main-only, mode, registry filters

Registry filters:

  • Hospital discharge: ICD-10 — N43.4
  • Hospital discharge: ICD-9 — 6081
  • Hospital discharge: ICD-8 — 6076
  • Cause of death: ICD-10 — N43.4
  • Cause of death: ICD-9 — 6081
  • Cause of death: ICD-8 — 6076

2 out of 7 registries used, show all original rules.

2460

4. Check minimum number of events

None

2460

5. Include endpoints

None

2460

6. Filter based on genotype QC (FinnGen only)

2382

Control definitions (FinnGen only)

Control exclude N14_MALEGEN

Extra metadata

Level in the ICD hierarchy 3
First used in FinnGen datafreeze DF2
Parent code in ICD-10 N43
Name in latin Spermatocele

Case counts by codes

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FinnGen case counts by registry codes:

generic upset plot

Upset plot

Full data table

Summary Statistics

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-FinRegistry-

Key figures

All Female Male
Number of individuals
Whole population 22725 - 22725
Only index persons 20586 - 20586
Unadjusted period prevalence (%)
Whole population 0.63 - 0.63
Only index persons 0.79 - 0.79
Median age at first event (years)
Whole population - - 56.34
Only index persons - - 55.56

-FinnGen-

Key figures

All Female Male
Number of individuals 2382 - 2382
Unadjusted period prevalence (%) 1.31 - 1.31
Median age at first event (years) 58.53 - 58.53

-FinRegistry-

Age distribution of first events

-FinnGen-

Age distribution of first events

-FinRegistry-

Year distribution of first events

-FinnGen-

Year distribution of first events

-FinRegistry-

Cumulative Incidence Function

-FinnGen-

Cumulative Incidence Function

Mortality – FinRegistry

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Relationships between endpoints

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Index endpoint: N14_SPERMATOCELE – Spermatocele

GWS hits: 4

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