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Pain and other conditions associated with female genital organs and menstrual cycle

EFO MESH Endpoint Browser PheWeb

N14_FEMGENPAIN

Endpoint definition

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Endpoint definition steps

FinnGen

Phenotype data

429209

1. Apply sex-specific rule

only females

239906

2. Check conditions

None

239906

3. Check pre-conditions, main-only, mode, registry filters

Registry filters:

  • Hospital discharge: ICD-10 — N94
  • Hospital discharge: ICD-9 — 625
  • Hospital discharge: ICD-8 — 6263
  • Hospital discharge: excluded ICD-9 — 6256
  • Cause of death: ICD-10 — N94
  • Cause of death: ICD-9 — 625
  • Cause of death: ICD-8 — 6263
  • Cause of death: excluded ICD-9 — 6256

2 out of 7 registries used, show all original rules.

8166

4. Check minimum number of events

None

8166

5. Include endpoints

8166

6. Filter based on genotype QC (FinnGen only)

7788

Control definitions (FinnGen only)

Control exclude N14_FEMALEGENNONINF

Extra metadata

Level in the ICD hierarchy 3
First used in FinnGen datafreeze DF2
Parent code in ICD-10 N80-N98
Name in latin Dolor et aliae condiciones organis genitalibus femininis et cyclo menstruali connectae

Case counts by codes

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FinnGen case counts by registry codes:

generic upset plot

Upset plot

Full data table

Summary Statistics

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-FinRegistry-

Key figures

All Female Male
Number of individuals
Whole population 61211 61211 -
Only index persons 59884 59884 -
Unadjusted period prevalence (%)
Whole population 1.75 1.75 -
Only index persons 2.20 2.20 -
Median age at first event (years)
Whole population - 32.56 -
Only index persons - 32.39 -

-FinnGen-

Key figures

All Female Male
Number of individuals 7788 7788 -
Unadjusted period prevalence (%) 3.38 3.38 -
Median age at first event (years) 35.01 35.01 -

-FinRegistry-

Age distribution of first events

-FinnGen-

Age distribution of first events

-FinRegistry-

Year distribution of first events

-FinnGen-

Year distribution of first events

-FinRegistry-

Cumulative Incidence Function

-FinnGen-

Cumulative Incidence Function

Mortality – FinRegistry

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Relationships between endpoints

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Index endpoint: N14_FEMGENPAIN – Pain and other conditions associated with female genital organs and menstrual cycle

GWS hits: 2

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