Granulomatous disorders of skin and subcutaneous tissue

L12_GRANULOMATOUSSKIN

Tuberculosis, Cutaneous: Tuberculosis of the skin. It includes scrofuloderma and tuberculid, but not LUPUS VULGARIS.

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Endpoint definition

Endpoint definition steps

FinnGen

Phenotype data

429209

1. Apply sex-specific rule

None

429209

2. Check conditions

None

429209

3. Check pre-conditions, main-only, mode, registry filters

Registry filters:

  • Hospital discharge: ICD-10 L92
  • Cause of death: ICD-10 L92

2 out of 7 registries used, show all original rules.

748

4. Check minimum number of events

None

748

5. Include endpoints

774

6. Filter based on genotype QC (FinnGen only)

747

Control definitions (FinnGen only)

Control exclude L12_OTHERSKINSUBCUTIS

Extra metadata

Level in the ICD hierarchy 3
First used in FinnGen datafreeze DF2
Parent code in ICD-10 L80-L99
Name in latin Morbositates granulomatosae cutis et telae subcutaneae

Similar endpoints

List of similar endpoints to Granulomatous disorders of skin and subcutaneous tissue based on the number of shared cases.

Venn diagram with an highlighted set fully inside another set Broader endpoints:

Venn diagram with a set fully inside an highlighted set Narrower endpoints:

Case counts by codes

FinnGen case counts by registry codes:

generic upset plot

Upset plot

Full data table

Summary Statistics

-FinRegistry-

Key figures

All Female Male
Number of individuals
Whole population 6497 4475 1996
Only index persons 6066 4239 1827
Unadjusted period prevalence (%)
Whole population 0.11 0.13 0.06
Only index persons 0.13 0.16 0.07
Median age at first event (years)
Whole population 48.67 49.20 47.60
Only index persons 48.68 49.22 47.42

-FinnGen-

Key figures

All Female Male
Number of individuals 747 559 188
Unadjusted period prevalence (%) 0.21 0.24 0.10
Median age at first event (years) 49.50 46.74 57.70

-FinRegistry-

Age distribution of first events

-FinnGen-

Age distribution of first events

-FinRegistry-

Year distribution of first events

-FinnGen-

Year distribution of first events

-FinRegistry-

Cumulative Incidence Function

-FinnGen-

Cumulative Incidence Function

Mortality – FinRegistry

Relationships between endpoints

Index endpoint: L12_GRANULOMATOUSSKIN – Granulomatous disorders of skin and subcutaneous tissue

GWS hits: 1

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