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Chronic periodontitis

EFO Endpoint Browser PheWeb

K11_PERIODON_CHRON

Endpoint definition

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Endpoint definition steps

FinnGen

Phenotype data

429209

1. Apply sex-specific rule

None

429209

2. Check conditions

None

429209

3. Check pre-conditions, main-only, mode, registry filters

Registry filters:

  • Hospital discharge: ICD-10 — K05.30, K05.31
  • Hospital discharge: ICD-9 — 5234
  • Hospital discharge: ICD-8 — 5234
  • Cause of death: ICD-10 — K05.30, K05.31
  • Cause of death: ICD-9 — 5234
  • Cause of death: ICD-8 — 5234

2 out of 7 registries used, show all original rules.

5060

4. Check minimum number of events

None

5060

5. Include endpoints

5060

6. Filter based on genotype QC (FinnGen only)

4784

Control definitions (FinnGen only)

Control exclude K11_ORAL

Extra metadata

First used in FinnGen datafreeze DF6

Case counts by codes

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FinnGen case counts by registry codes:

generic upset plot

Upset plot

Full data table

Summary Statistics

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-FinRegistry-

Key figures

All Female Male
Number of individuals
Whole population 37375 15406 21629
Only index persons 34698 14656 20042
Unadjusted period prevalence (%)
Whole population 0.53 0.44 0.60
Only index persons 0.67 0.54 0.77
Median age at first event (years)
Whole population 59.65 60.10 59.44
Only index persons 59.53 59.92 59.25

-FinnGen-

Key figures

All Female Male
Number of individuals 4784 2007 2777
Unadjusted period prevalence (%) 1.25 0.87 1.53
Median age at first event (years) 61.17 59.51 62.37

-FinRegistry-

Age distribution of first events

-FinnGen-

Age distribution of first events

-FinRegistry-

Year distribution of first events

-FinnGen-

Year distribution of first events

-FinRegistry-

Cumulative Incidence Function

-FinnGen-

Cumulative Incidence Function

Mortality – FinRegistry

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Relationships between endpoints

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Index endpoint: K11_PERIODON_CHRON – Chronic periodontitis

GWS hits: 1

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