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Cholelithiasis

DOID EFO Endpoint Browser PheWeb

K11_CHOLELITH

Endpoint definition

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Endpoint definition steps

FinnGen

Phenotype data

429209

1. Apply sex-specific rule

None

429209

2. Check conditions

None

429209

3. Check pre-conditions, main-only, mode, registry filters

Registry filters:

  • Hospital discharge: ICD-10 — K80
  • Hospital discharge: ICD-9 — 574
  • Hospital discharge: ICD-8 — 574
  • Cause of death: ICD-10 — K80
  • Cause of death: ICD-9 — 574
  • Cause of death: ICD-8 — 574

2 out of 7 registries used, show all original rules.

41628

4. Check minimum number of events

None

41628

5. Include endpoints

None

41628

6. Filter based on genotype QC (FinnGen only)

40191

Control definitions (FinnGen only)

Control exclude K11_GALLBILPANC

Extra metadata

Level in the ICD hierarchy 3
First used in FinnGen datafreeze DF2
Parent code in ICD-10 K80-K87
Name in latin Cholelithiasis

Case counts by codes

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FinnGen case counts by registry codes:

generic upset plot

Upset plot

Full data table

Summary Statistics

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-FinRegistry-

Key figures

All Female Male
Number of individuals
Whole population 441478 299595 137690
Only index persons 355443 249330 106113
Unadjusted period prevalence (%)
Whole population 7.06 8.58 3.85
Only index persons 7.64 9.17 4.05
Median age at first event (years)
Whole population 56.10 53.78 60.99
Only index persons 53.27 50.99 58.61

-FinnGen-

Key figures

All Female Male
Number of individuals 40191 27132 13059
Unadjusted period prevalence (%) 10.29 11.78 7.18
Median age at first event (years) 52.40 48.55 60.40

-FinRegistry-

Age distribution of first events

-FinnGen-

Age distribution of first events

-FinRegistry-

Year distribution of first events

-FinnGen-

Year distribution of first events

-FinRegistry-

Cumulative Incidence Function

-FinnGen-

Cumulative Incidence Function

Mortality – FinRegistry

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Relationships between endpoints

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Index endpoint: K11_CHOLELITH – Cholelithiasis

GWS hits: 84

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