Cholecystectomy

K11_CHOLECYSTECTOMY

Endpoint definition

Endpoint definition steps

FinnGen

Phenotype data

429209

1. Apply sex-specific rule

None

429209

2. Check conditions

None

429209

3. Check pre-conditions, main-only, mode, registry filters

Registry filters:

  • Operations: NOMESCO codes ^JKA2
  • Operations: Finnish Hospital League codes ^666[2-5]$

1 out of 7 registries used, show all original rules.

30228

4. Check minimum number of events

None

30228

5. Include endpoints

None

30228

6. Filter based on genotype QC (FinnGen only)

29157

Control definitions (FinnGen only)

Controls for this endpoint are individuals that are not cases.

Extra metadata

First used in FinnGen datafreeze DF6v3

Case counts by codes

FinnGen case counts by registry codes:

generic upset plot

Upset plot

Full data table

Summary Statistics

-FinRegistry-

Key figures

All Female Male
Number of individuals
Whole population 223178 146757 75126
Only index persons 208220 139765 68455
Unadjusted period prevalence (%)
Whole population 3.48 4.20 2.10
Only index persons 4.31 5.14 2.61
Median age at first event (years)
Whole population 56.91 54.58 61.49
Only index persons 56.01 53.83 60.45

-FinnGen-

Key figures

All Female Male
Number of individuals 29157 19625 9532
Unadjusted period prevalence (%) 7.45 8.52 5.24
Median age at first event (years) 54.59 51.19 61.58

-FinRegistry-

Age distribution of first events

-FinnGen-

Age distribution of first events

-FinRegistry-

Year distribution of first events

-FinnGen-

Year distribution of first events

-FinRegistry-

Cumulative Incidence Function

-FinnGen-

Cumulative Incidence Function

Mortality – FinRegistry

Relationships between endpoints

Index endpoint: K11_CHOLECYSTECTOMY – Cholecystectomy

GWS hits: 47

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