Viral pneumonia

J10_VIRALPNEUMO

Endpoint definition

Endpoint definition steps

FinnGen

Phenotype data

429209

1. Apply sex-specific rule

None

429209

2. Check conditions

None

429209

3. Check pre-conditions, main-only, mode, registry filters

Registry filters:

  • Hospital discharge: ICD-10 J12|J171|J100|J110|B012|B068|B250
  • Hospital discharge: ICD-9 480|4870A
  • Hospital discharge: ICD-8 48099|47101|47109
  • Cause of death: ICD-10 J12|J171|J100|J110|B012|B068|B250
  • Cause of death: ICD-9 480|4870A
  • Cause of death: ICD-8 48099|47101|47109

2 out of 7 registries used, show all original rules.

3985

4. Check minimum number of events

None

3985

5. Include endpoints

None

3985

6. Filter based on genotype QC (FinnGen only)

3777

Control definitions (FinnGen only)

Control exclude J10_INFLUPNEU

Extra metadata

Level in the ICD hierarchy 3
First used in FinnGen datafreeze DF2

Case counts by codes

FinnGen case counts by registry codes:

generic upset plot

Upset plot

Full data table

Summary Statistics

-FinRegistry-

Key figures

All Female Male
Number of individuals
Whole population 47722 21518 25878
Only index persons 39771 17942 21829
Unadjusted period prevalence (%)
Whole population 0.67 0.62 0.72
Only index persons 0.75 0.66 0.83
Median age at first event (years)
Whole population 49.11 56.07 43.15
Only index persons 46.32 54.15 39.88

-FinnGen-

Key figures

All Female Male
Number of individuals 3777 1777 2000
Unadjusted period prevalence (%) 0.95 0.77 1.10
Median age at first event (years) 56.96 53.87 59.71

-FinRegistry-

Age distribution of first events

-FinnGen-

Age distribution of first events

-FinRegistry-

Year distribution of first events

-FinnGen-

Year distribution of first events

-FinRegistry-

Cumulative Incidence Function

-FinnGen-

Cumulative Incidence Function

Mortality – FinRegistry

Relationships between endpoints

Index endpoint: J10_VIRALPNEUMO – Viral pneumonia

GWS hits: 1

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