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Acute nasopharyngitis(common cold)

DOID EFO Endpoint Browser PheWeb

J10_COLD

common cold: An upper respiratory tract disease which involves inflammation of the mucous membranes of the nose, throat, eyes, and eustachian tubes with watery then purulent discharge. This is an acute contagious disease caused by rhinoviruses, human parainfluenza viruses, human respiratory syncytial virus, influenza viruses, adenoviruses, enteroviruses, or metapneumovirus.

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Endpoint definition

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Endpoint definition steps

FinnGen

Phenotype data

429209

1. Apply sex-specific rule

None

429209

2. Check conditions

None

429209

3. Check pre-conditions, main-only, mode, registry filters

Registry filters:

  • Hospital discharge: ICD-10 — J00
  • Hospital discharge: ICD-9 — 460
  • Hospital discharge: ICD-8 — 460
  • Cause of death: ICD-10 — J00
  • Cause of death: ICD-9 — 460
  • Cause of death: ICD-8 — 460

2 out of 7 registries used, show all original rules.

4554

4. Check minimum number of events

None

4554

5. Include endpoints

None

4554

6. Filter based on genotype QC (FinnGen only)

4430

Control definitions (FinnGen only)

Control exclude J10_UPPERINFEC

Extra metadata

Level in the ICD hierarchy 3
First used in FinnGen datafreeze DF2
Parent code in ICD-10 J00-J06
Name in latin Nasopharyngitis acuta

Case counts by codes

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FinnGen case counts by registry codes:

generic upset plot

Upset plot

Full data table

Summary Statistics

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-FinRegistry-

Key figures

All Female Male
Number of individuals
Whole population 65629 15921 49486
Only index persons 56960 12411 44549
Unadjusted period prevalence (%)
Whole population 1.15 0.46 1.38
Only index persons 1.43 0.46 1.70
Median age at first event (years)
Whole population 20.93 23.74 19.98
Only index persons 20.79 23.64 20.00

-FinnGen-

Key figures

All Female Male
Number of individuals 4430 1277 3153
Unadjusted period prevalence (%) 1.39 0.55 1.73
Median age at first event (years) 22.00 26.56 20.15

-FinRegistry-

Age distribution of first events

-FinnGen-

Age distribution of first events

-FinRegistry-

Year distribution of first events

-FinnGen-

Year distribution of first events

-FinRegistry-

Cumulative Incidence Function

-FinnGen-

Cumulative Incidence Function

Mortality – FinRegistry

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Relationships between endpoints

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Index endpoint: J10_COLD – Acute nasopharyngitis(common cold)

GWS hits: -

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