≡ Risteys
FR+FG R10

Documentation Changelog GitHub Contact & Feedback

Malignant neoplasm of breast, HER-positive (controls excluding all cancers)

Endpoint Browser PheWeb

C3_BREAST_ERPLUS_EXALLC

Endpoint definition

↥

Endpoint definition steps

FinnGen

Phenotype data

1. Apply sex-specific rule

only females

-

2. Check conditions

  • RX_ERPLUS
-

3. Check pre-conditions, main-only, mode, registry filters

Registry filters:

  • Cause of death: ICD-10 — C50
  • Cause of death: ICD-9 — 174
  • Cause of death: ICD-8 — 174
  • Cancer registry: Topography ICD-O-3 — C50
  • Cancer registry: Morphology ICD-O-3 — ANY
  • Cancer registry: Behaviour codes — [23]

2 out of 7 registries used, show all original rules.

-

4. Check minimum number of events

None

-

5. Include endpoints

None

-

6. Filter based on genotype QC (FinnGen only)

None

-

Control definitions (FinnGen only)

Control exclude C3_CANCER, C3_CANCER_WIDE
Control conditions not RX_ERPLUS

Extra metadata

Level in the ICD hierarchy 2
First used in FinnGen datafreeze DF9

Case counts by codes

↥

FinnGen case counts by registry codes:

No upset plot: script not run.

No upset table: script not run.

Summary Statistics

↥

-FinRegistry-

Key figures

All Female Male
Number of individuals
Whole population 70180 70180 -
Only index persons 63308 63308 -
Unadjusted period prevalence (%)
Whole population 2.01 2.01 -
Only index persons 2.33 2.33 -
Median age at first event (years)
Whole population - 61.49 -
Only index persons - 61.50 -

-FinnGen-

Key figures

All Female Male
Number of individuals 10404 10404 -
Unadjusted period prevalence (%) 4.52 4.52 -
Median age at first event (years) 59.47 59.47 -

-FinRegistry-

Age distribution of first events

-FinnGen-

Age distribution of first events

-FinRegistry-

Year distribution of first events

-FinnGen-

Year distribution of first events

-FinRegistry-

Cumulative Incidence Function

-FinnGen-

Cumulative Incidence Function

Mortality – FinRegistry

↥

Relationships between endpoints

↥

Index endpoint: C3_BREAST_ERPLUS_EXALLC – Malignant neoplasm of breast, HER-positive (controls excluding all cancers)

GWS hits: 45

loading spinner Loading Relationships table