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Scabies

Endpoint Browser PheWeb

AB1_SCABIES

Endpoint definition

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Endpoint definition steps

FinnGen

Phenotype data

429209

1. Apply sex-specific rule

None

429209

2. Check conditions

None

429209

3. Check pre-conditions, main-only, mode, registry filters

Registry filters:

  • Hospital discharge: ICD-10 — B86
  • Hospital discharge: ICD-9 — 1330A
  • Hospital discharge: ICD-8 — 1330
  • Cause of death: ICD-10 — B86
  • Cause of death: ICD-9 — 1330A
  • Cause of death: ICD-8 — 1330

2 out of 7 registries used, show all original rules.

1279

4. Check minimum number of events

None

1279

5. Include endpoints

None

1279

6. Filter based on genotype QC (FinnGen only)

1244

Control definitions (FinnGen only)

Extra metadata

Level in the ICD hierarchy 3
First used in FinnGen datafreeze DF5

Case counts by codes

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FinnGen case counts by registry codes:

generic upset plot

Upset plot

Full data table

Summary Statistics

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-FinRegistry-

Key figures

All Female Male
Number of individuals
Whole population 18964 6637 12241
Only index persons 16643 5825 10818
Unadjusted period prevalence (%)
Whole population 0.29 0.19 0.34
Only index persons 0.34 0.21 0.41
Median age at first event (years)
Whole population 20.91 21.44 20.50
Only index persons 21.13 22.22 20.54

-FinnGen-

Key figures

All Female Male
Number of individuals 1244 515 729
Unadjusted period prevalence (%) 0.33 0.22 0.40
Median age at first event (years) 23.83 27.80 21.03

-FinRegistry-

Age distribution of first events

-FinnGen-

Age distribution of first events

-FinRegistry-

Year distribution of first events

-FinnGen-

Year distribution of first events

-FinRegistry-

Cumulative Incidence Function

-FinnGen-

Cumulative Incidence Function

Mortality – FinRegistry

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Relationships between endpoints

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Index endpoint: AB1_SCABIES – Scabies

GWS hits: 1

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